PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_72614.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 270aa    MW: 29252.7 Da    PI: 5.2045
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_72614.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH14.75.8e-054590554
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
           HLH  5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                  + erE+  Rd +N+ f+eL e+l  +     + + Ka iL+ +++ +++L
  MLOC_72614.1 45 KAEREKHKRDLLNDLFSELGEMLEAD----RQTNGKACILTDTTRILRDL 90
                  679********************997....57788888998888887776 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474591.18E-1038110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.3E-839110IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.9094090IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010106Biological Processcellular response to iron ion starvation
GO:0055072Biological Processiron ion homeostasis
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 270 aa     Download sequence    Send to blast
MVAMLPAARG DAAPATSAGA AEKLVHRGPG TDGKYKKKAP RMVHKAEREK HKRDLLNDLF  60
SELGEMLEAD RQTNGKACIL TDTTRILRDL LSQLESLRQE NSTLQNESHY VTMERNELQD  120
ENGVLRNEIL ELQNELTMRP AGNPGWGHAT AGSPHAVSHP ASTVFPSQQP PTIPSAVFPL  180
QQPLQQPTVM EPPPPRELKL FPDAASDIEC PEPSEDQEAA NHIARPLARY PAQSASWPVS  240
LGLPRMEDEQ CSSGATGSSK EGSSSASSGD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3570740.0AK357074.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1045H23.
GenBankAK3651650.0AK365165.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2031J07.
GenBankAK3657890.0AK365789.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2037M02.
GenBankAK3702140.0AK370214.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2106P13.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003557817.11e-130PREDICTED: transcription factor bHLH47
TrEMBLM0YT370.0M0YT37_HORVD; Uncharacterized protein
STRINGMLOC_72614.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP24813884
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G47640.32e-22bHLH family protein